Related by context. All words. (Click for frequent words.) 67 A. thaliana 64 clonally 64 polyploid 63 introgression 62 genotypes 62 P. patens 62 diploid 61 tetraploid 61 #S rDNA 61 rDNA 61 transgene 60 orthologs 60 microsatellite markers 60 transposable elements 60 transgenes 60 mutant allele 59 symbiont 59 germline 59 eukaryote 59 Arabidopsis genome 59 meristem 59 chloroplast 59 gene rearrangements 59 cDNAs 59 chloroplast genome 59 transgene expression 59 Phytophthora species 58 polyploidy 58 #S rRNA gene 58 Agrobacterium 58 S. cerevisiae 58 Clonal 58 mutagenesis 58 haploid 58 clades 58 nucleotide substitution 58 desiccation tolerance 58 missense mutations 58 Trichoderma 58 suppressor gene 58 glabrata 58 mosaicism 58 outcrossing 58 Agrobacterium tumefaciens 58 ploidy 58 vegetatively 58 metazoan 58 phenotypic variation 58 sexually reproducing 58 alternatively spliced 57 gambiae 57 archaeal 57 monophyletic 57 coevolution 57 Amborella 57 #S rRNA 57 yeast Saccharomyces cerevisiae 57 paralogs 57 monocots 57 maternally inherited 57 inbred strains 57 phenotype 57 C. albicans 57 ESTs 57 H#K#me# 57 heterochromatic 57 sequenced genomes 57 Saccharomyces cerevisiae 57 cytochrome b 57 selfing 57 Brassica napus 57 DNA demethylation 57 immunoglobulin genes 57 alleles 57 somatic embryogenesis 56 Alu elements 56 phylogenies 56 cDNA library 56 female gametophyte 56 Arabidopsis plants 56 genotypic 56 mitochondrial gene 56 Bt toxins 56 cDNA libraries 56 spontaneous mutation 56 phylogenetic analyzes 56 Vitis vinifera 56 HepG2 cells 56 plastid 56 subgenus 56 heritable traits 56 transfected cells 56 phenotypes 56 orthologous 56 heterozygous 56 T. brucei 56 lymphoid cells 56 phenotypic traits 56 ABCB1 gene 56 H#Y 56 primordial germ cells 56 virulence genes 56 subsp 56 sequence homology 56 chloroplast DNA 56 Xenopus laevis 56 quasispecies 56 prion gene 56 evolvability 56 Fabaceae 56 CRISPR 55 intergenic regions 55 synthases 55 unmutated 55 gene duplications 55 Arabidopsis thaliana 55 QTLs 55 speciation 55 progranulin gene 55 intergenic 55 operons 55 germline cells 55 cellulases 55 Trichoderma reesei 55 Cre recombinase 55 mutant alleles 55 fungal genomes 55 bacterial symbiont 55 VNTR 55 FLT3 55 mycobacterial 55 taxa 55 VHL gene 55 D. melanogaster 55 mtDNA mutations 55 RNA sequences 55 somatic mutations 55 S. enterica 55 hybridomas 55 mammalian genomes 55 imprinted genes 55 budding yeast 55 Bacteroides 55 neoplastic 55 indel 55 cathepsin B 55 intron 55 mitochondrial genomes 55 resistant isolates 55 transcriptomic 55 neural progenitor 55 aneuploid 55 transcriptional regulation 55 Aspergillus species 55 M. genitalium 55 epistasis 55 viral genome 55 angiosperm 55 transcriptional repressor 55 transcriptomes 55 splice variants 55 polyploids 55 mutualistic 55 cotyledon 55 neural crest 55 cDNA 55 resistant mutants 55 phenotypic expression 54 eukaryotic 54 replicase 54 unmethylated 54 passaging 54 RNA polymerases 54 phylogeny 54 heterozygotes 54 morphogen 54 phylogenetic 54 Saccharomyces 54 constitutively expressed 54 M. pneumoniae 54 germ plasm 54 bacterial genomes 54 endophyte 54 Phylogenetic 54 ribosomal DNA 54 phylogenetic analysis 54 cyclin E 54 trophoblast cells 54 cis regulatory 54 lineages 54 vivax 54 orthologous genes 54 coding exons 54 mRNA transcripts 54 mammary carcinoma 54 coexpression 54 rRNA 54 heterozygosity 54 blastomeres 54 mutations 54 prokaryotic 54 pea aphid 54 Anopheles gambiae 54 abiotic stress 54 nodulation 54 C#BL 6 mice 54 Rickettsia 54 Supplementary Fig 54 nucleolar 54 transgenic plants 54 heterologous 54 cDNA microarray 54 K#R [002] 54 coding sequences 54 autoreactive 54 short hairpin RNAs 54 outer membrane proteins 54 albicans 54 phylogenetically 54 Phenotypic 54 rhizobia 54 genotype 54 retroviral vector 54 metaplasia 54 homodimers 54 CpG 54 HLA alleles 54 differential gene expression 54 allelic 54 phylogenetic trees 54 constitutively 54 P. infestans 54 hematopoietic cells 54 MHC genes 54 #q#.# [002] 54 indels 54 tumor antigen 54 metazoans 54 QTL mapping 54 segmental duplications 54 vernalization 54 C. jejuni 54 DNMT1 54 differentially expressed genes 54 microsporidia 54 quantitative trait loci 54 endonuclease 54 rhizosphere 54 ribosomal RNA 53 clonal reproduction 53 angiosperms 53 Eukaryotic 53 isogenic 53 Brassica 53 ERK2 53 overexpressing 53 amplicons 53 Cucumis 53 genetic variability 53 transcriptome 53 mammary stem cells 53 Streptomyces 53 isoforms 53 Leptospira 53 Candida species 53 chimerism 53 pathogen 53 N. gonorrhoeae 53 embryoid bodies 53 ciliated 53 homozygosity 53 centromeric 53 biotypes 53 MC1R gene 53 endophytic 53 eukaryotic cell 53 BAC clones 53 V. cholerae 53 Phylogenetic analysis 53 homologs 53 gene amplification 53 MEFs 53 hepatoma 53 protein phosphorylation 53 C. difficile toxins 53 genetic recombination 53 operon 53 wildtype 53 phenotypic 53 lysine residues 53 genes encoding 53 latifolia 53 At#g# 53 genetic polymorphism 53 prokaryote 53 3'UTR 53 deacetylation 53 Bt toxin 53 ovules 53 meiotic 53 chromosomal rearrangement 53 Fig. 3A 53 C. neoformans 53 reproductively isolated 53 sporulation 53 transmembrane domains 53 polynucleotides 53 polynucleotide 53 ncRNA 53 Genetic variation 53 Phytophthora sojae 53 Th2 53 genomic alterations 53 mycobacteria 53 deleterious mutations 53 CpG island 53 N. benthamiana 53 cellulase 53 germline mutations 53 multigene 53 noncoding 53 Buchnera 53 RNA viruses 53 molecular markers 53 eusociality 53 conserved sequences 53 asexually 53 genomic 53 monomorphic 53 mesenchymal stem cells MSCs 53 retrotransposon 53 miRNAs 53 haplogroups 53 recombinants 53 Sub1 53 allele frequencies 53 gene inactivation 53 splice variant 53 Chinese Hamster Ovary 53 pDCs 53 translocations 53 NF1 gene 53 biosynthetic pathways 53 plastids 53 MAPK pathway 53 polypeptide 53 globin gene 53 gymnosperms 53 Prevotella 53 plantlets 53 ecotype 53 miRNA expression 53 synteny 53 parasitoid 53 hyphae 52 heterozygote 52 transient transfection 52 viral antigen 52 subfamilies 52 nucleotide substitutions 52 soybean Glycine max 52 parasitoid wasp 52 replicative 52 Fig. 2B 52 HLA molecules 52 phenotypically 52 Cry1Ac 52 Pseudomonas syringae 52 subtilis 52 Bt cotton hybrids 52 proteolytic cleavage 52 parthenogenetic 52 short hairpin RNA 52 Bt varieties 52 PBMCs 52 multicellularity 52 vegetative propagation 52 Leydig cells 52 COL#A# 52 transcriptome sequencing 52 evolutionarily conserved 52 progenitor cell 52 transmembrane receptor 52 Candida albicans 52 endophytic bacteria 52 transgenic rats 52 rust fungi 52 endosymbiont 52 epigenetic regulation 52 distinct lineages 52 spore formation 52 parasitoids 52 exonuclease 52 peroxisome 52 A. niger 52 virions 52 untranslated regions 52 denaturing gradient gel electrophoresis 52 dinucleotide 52 olfactory receptor 52 polypeptides 52 hypermethylated 52 eukaryotic genomes 52 linkage disequilibrium 52 Mendelian 52 ribonucleic acids 52 neutralizing antibody responses 52 glycosylated 52 Brassica oleracea 52 CCL#L# 52 karyotypes 52 contigs 52 cell lysate 52 Pichia pastoris 52 activating mutation 52 antigenic epitopes 52 genomic sequence 52 isoenzymes 52 abscission 52 MDCK cells 52 transmembrane protein 52 CYP#B# 52 missense mutation 52 piRNAs 52 plant Arabidopsis thaliana 52 androgen receptor AR 52 C#BL/#J 52 transgenic 52 uPAR 52 RNA transcripts 52 Propionibacterium 52 chromosomal DNA 52 biogenesis 52 Bacillus subtilis 52 transfected 52 Drosophila genome 52 secondary metabolites 52 nucleotide sequence 52 Solanum 52 mycorrhiza 52 splice junctions 52 insecticidal protein 52 transdifferentiation 52 posttranslational modifications 52 retrotransposons 52 effector molecules 52 peroxidase 52 Drosophila melanogaster 52 histone acetylation 52 glycoproteins 52 maize genome 52 bryophytes 52 genes 52 phospholipase 52 Sertoli cells 52 breast carcinomas 52 Amino acid 52 epigenetic reprogramming 52 lymphocytic 52 gene sequences 52 dimorphic 52 phage 52 transcriptome profiling 52 mutation 52 methylation patterns 52 allelic variants 52 nitrogen fixing 52 Rap1 52 homozygote 52 epigenetic mechanisms 52 Deinococcus 52 metabolomic profiles 52 pigeonpea 52 TMPRSS2 ERG fusion 52 Dictyostelium 52 Wolbachia 52 chromosome #q 52 chromosomal translocations 52 mediated inhibition 52 activin 52 Asteraceae 52 subfamily 52 clonal expansion 52 commensal 52 V#F mutation 52 HBV genotype 52 angiosperms flowering plants 52 C#BL 6 52 interspecific 52 hexose 52 PON1 52 primate genomes 52 mRNA molecules 52 Penicillium 52 IFN gamma 52 Arabidopsis 52 chromosome rearrangements 52 polyketides 52 root knot nematode 52 defensin 52 lentiviral 52 staphylococci 52 kDa protein 52 chromosomal regions 52 mitochondrial DNA mtDNA 52 chordates 52 trophoblast 52 plectasin 52 monozygotic twins 52 mtDNA 52 K ras gene 52 UGT#B# 52 fungal pathogens 52 demethylase 52 photosynthetic 52 glyphosate resistant 52 p# activation 52 genome 52 ribosomal genes 52 outbred 52 miRNA sequences 51 epidermidis 51 mitochondrial genome 51 lactose tolerance 51 CCR7 51 Corynebacterium 51 substrate specificity 51 LRAT 51 MECP2 gene 51 eukaryotic organisms 51 constitutively active 51 C#Y 51 gene locus 51 meiotic recombination 51 obligate intracellular 51 beta globin 51 granulocyte 51 α KG 51 ribosomal RNA genes 51 CRISPR Cas 51 qRT PCR 51 cellular prion protein 51 miRNA 51 viral genomes 51 TCF#L# gene 51 tetramers 51 functional polymorphism 51 mycorrhizal fungi 51 Phylogenetic analyzes 51 KLF4 51 cDNA sequences 51 globin genes 51 somatic mutation 51 dermatophytes 51 Plasmodium 51 cytotoxicity assays 51 X inactivation 51 nucleotide 51 endosymbiosis 51 rickettsial 51 trypanosome 51 secreted proteins 51 reproduce asexually 51 divide asymmetrically 51 non coding RNA 51 proline rich 51 multicellular 51 beta globin gene 51 polymorpha 51 Trichophyton rubrum 51 BCL#A 51 STK# [002] 51 proteomic analysis 51 Bt genes 51 gametophyte 51 lymphocyte 51 H#K# [002] 51 Sanger sequencing 51 hypervariable 51 Plasmodium vivax 51 glycan 51 #p# [003] 51 HLA DRB1 51 mycelia 51 subcellular compartments 51 genotoxic stress 51 mammalian proteins 51 eukaryotes 51 ortholog 51 S. Typhimurium 51 P. falciparum 51 Brassicaceae 51 Bt gene 51 globin 51 Htt 51 structural rearrangements 51 MSH2 51 replicon 51 CD1d 51 hematopoetic stem cells 51 homologues 51 genetic alterations 51 mesenchymal cell 51 trans splicing 51 P. gingivalis 51 HeLa cell 51 brucei 51 Foxp3 51 Mammalian 51 allelic variation 51 microbiota 51 enzymatic activity 51 genomic DNA 51 HER2 neu 51 ORFs 51 antisera 51 Trichophyton 51 gonadotropins 51 recombination hotspots 51 distinct subtypes 51 CYP#D# gene 51 filamentous fungus 51 terrestrial vertebrates 51 prodynorphin 51 PAX5 51 DEAR1 51 phenotypic plasticity 51 de novo mutations 51 ultraconserved elements 51 glycosylation 51 Prox1 51 HLA DQ2 51 Prochlorococcus 51 vertebrate genomes 51 chromatin structure 51 X chromosome inactivation 51 viroid 51 miRNA genes 51 haematopoietic 51 Nup# 51 nutrient uptake 51 sphingolipid 51 PCR amplified 51 siderophore 51 morula 51 mutational 51 pseudogenes 51 leukemic stem cells 51 backcrossing 51 lymphoid organs 51 Bt crops 51 FGFR2 51 chromosomal rearrangements 51 pea aphids 51 5 hydroxymethylcytosine 51 transcriptional profiling 51 evolutionary divergence 51 Pol IV 51 pathogenic mutations 51 ligand receptor 51 inducible 51 tumorigenicity 51 Burkholderia 51 V3 loop 51 Borrelia 51 thymocyte 51 CHD7 51 synuclein 51 TAp# 51 glutamic acid decarboxylase 51 Th2 responses 51 breast cancer subtypes 51 Plasmodium falciparum 51 methylated DNA 51 dsRNA 51 chromosomal instability 51 phenotypic characteristics 51 allele 51 neural cells 51 eukaryotic cells 51 ubiquitylation 51 ontogenetic 51 morphologically distinct 51 K RAS 51 sequence tags ESTs 51 CDK4 51 nucleases 51 transferase 51 genetic loci 51 chromosomal 51 agronomically important 51 retroviral 51 Typhi 51 genetically diverse 51 transcriptionally active 51 Cyclin E 51 gene deletions 51 fig. S4 51 protein tyrosine phosphatase 51 Bt hybrids 51 arabidopsis 51 epigenetic silencing 51 jasmonate 51 hybridizations 51 site directed mutagenesis 51 microRNA expression 51 hypermethylation 51 genes differentially expressed 51 centromere 51 LRRK2 gene 51 transgenic varieties 51 chick embryo 50 c Myb 50 herpesviruses 50 germline mutation 50 Phaseolus vulgaris 50 Genotypic 50 spontaneous mutations 50 Fig. 1A 50 Oryza sativa 50 CYP #D# 50 cultivars 50 PTPN# 50 ncRNAs 50 provirus 50 germplasm 50 iPSC 50 homologous 50 hematopoietic progenitors 50 genome rearrangements 50 etiologic agent 50 A. gambiae 50 P. aeruginosa 50 biotype 50 beta actin 50 stem progenitor cells 50 HbF 50 chloroplasts 50 paternally inherited 50 D. simulans 50 fungal organism 50 #q#.# [001] 50 Trypanosoma brucei 50 primordia 50 Aspergillus oryzae 50 inactivating mutations 50 antisense oligonucleotides 50 undifferentiated cells 50 homologous recombination 50 hpSC 50 ALK mutations 50 methyltransferase 50 intraspecific 50 Lymphocyte 50 Karayiorgou 50 intronic 50 epitope 50 hemoglobins 50 deletion mutant 50 hESCs 50 proto oncogene 50 T. vaginalis 50 MeCP2 gene 50 Beema Bamboo 50 ciliates 50 gene 50 genomic instability 50 Dehalococcoides 50 propagules 50 recombinant antibodies 50 L. pneumophila 50 NOD mouse 50 cathepsins 50 trinucleotide repeat 50 teosinte 50 PGCs 50 neural progenitor cells 50 granulosa cell 50 Single Nucleotide Polymorphisms SNPs 50 fig. S3 50 secretory pathway 50 avium 50 posttranslational modification 50 sRNA 50 B. subtilis 50 immunodominant 50 virulence determinants 50 chromosomal deletions 50 human ESCs 50 noncoding RNA 50 proteolytic enzymes 50 genetic sequences 50 malarial parasites 50 oligo 50 exons 50 HLA G 50 bacterial virulence 50 intracellular bacteria 50 IFN alpha 50 KRAS gene 50 mRNA expression 50 MLH1 50 transgenesis 50 Nasonia 50 adipocyte 50 major histocompatibility complex 50 Heliconius 50 MALAT1 50 acetylation 50 polyglutamine 50 mammalian cells 50 mRNAs 50 histone modification 50 subcellular 50 hippocampal neurons 50 genetically identical 50 germ cells 50 chordate 50 synthetic analogues 50 X. laevis 50 FGF signaling 50 IPSCs 50 ChR2 50 superfamily 50 multicellular organism 50 metapopulation 50 oligosaccharide 50 dimeric 50 PTEN gene 50 deuterostomes 50 E#F# 50 transgenic mouse model 50 P. ramorum 50 Nicotiana benthamiana 50 causative genes 50 polyamines 50 silico prediction 50 organismal 50 allelopathic 50 taxon 50 oryzae 50 chromosomal aberrations 50 M. anisopliae 50 PrPSc 50 noncoding DNA 50 hemagglutinin gene 50 DGGE 50 suppresses tumor 50 homozygous 50 receptor gene 50 pseudogene 50 circadian clock genes 50 haplotype map 50 centromeres 50 nucleosides 50 Proteobacteria 50 agronomic traits 50 polyculture 50 Transcriptome 50 mycorrhizal 50 DNA rearrangements 50 Clusterin 50 tetramer 50 landraces 50 KRAS BRAF 50 adenoviral 50 Fig. 2C 50 lactase persistence 50 filoviruses 50 germline stem cells 50 inflorescences 50 genetic lineages 50 #S rRNA genes 50 opportunistic pathogen 50 gene expression 50 induced pluripotent stem cell 50 Arabidopsis genes 50 hybridization 50 polyQ 50 metabolome 50 cybrid 50 glucan 50 histone H3 50 nitrogenase 50 lectin 50 phenotypic differences 50 prion strains 50 CCR5 delta# 50 proteolytic 50 follicular fluid 50 Cry1Ab 50 potent inducer 50 isomerase 50 proteomes 50 APOL1 50 mammalian species 50 Vps# 50 Haplotype 50 Solanaceae 50 aneuploid cells 50 ESR1 50 eusocial 50 exon 50 noncoding RNAs 50 Treg cell 50 fungal pathogen 50 KIAA# 50 coding RNA 50 phylogenetic tree 50 atmospheric CO2 enrichment 50 HCV replicon 50 DNA methylation patterns 50 Aspergillus flavus 50 supertree 50 spermatogonial stem cells 49 monocyte 49 recessive trait 49 multicellular organisms 49 Fig. 1C 49 p# NTR 49 peroxisomes 49 chimeric protein 49 antibiotic resistance genes 49 mutational analysis 49 GSTT1 49 sativum 49 rice Oryza sativa 49 dedifferentiation 49 K ras 49 centrosomes 49 MLL gene 49 loci 49 sexually dimorphic 49 agouti gene 49 prokaryotes 49 Caenorhabditis 49 biosynthetic pathway 49 vasopressin receptor 49 kurstaki 49 glycolipids 49 rootstocks 49 Volvox 49 P cadherin 49 Helicoverpa armigera 49 GPx 49 GSTP1 49 leguminous 49 yeast genome 49 microdeletions 49 hTERT 49 epigenetic modifications 49 segmental duplication 49 organism genome 49 phylogenetic relationships 49 lactis 49 fluoroquinolone resistant 49 Fc receptor 49 asexual reproduction 49 cerevisiae 49 hMSCs 49 Enterobacter 49 fluoroquinolone resistance 49 malignant phenotype 49 epigenetically 49 amino acid substitutions 49 fruiting bodies 49 experimentally validated 49 embryonic stem ES 49 Comparative genomics 49 CCR1 49 gametocytes 49 fission yeast 49 noncoding regions 49 odorant receptor 49 cytosine methylation 49 immunological 49 Eukaryotes 49 DNA polymerases 49 E. faecalis 49 recessive mutation 49 IgE antibody 49 vesicular stomatitis virus 49 Fig. 3b 49 aminopeptidase 49 RNA ribonucleic acid 49 histocompatibility 49 EBNA1 49 M. bovis 49 ovule 49 organogenesis 49 multigenic 49 oligonucleotide microarrays 49 Polymorphisms 49 homeobox genes 49 HEK# cells 49 differentially expressed 49 tyrosine phosphorylation 49 bacterial pathogen 49 metalloprotease