Related by context. All words. (Click for frequent words.) 74 archaeal 73 prokaryotic 71 eukaryote 71 eukaryotes 69 homologs 69 metazoan 69 orthologs 68 mammalian 68 evolutionarily conserved 68 eukaryotic cells 68 biogenesis 68 homology 68 homologues 67 substrate specificity 67 #S rRNA 67 tRNA synthetase 67 Archaea 67 superfamily 67 A. thaliana 66 eukaryotic organisms 66 chloroplast 66 RNA sequences 66 unicellular 66 transcriptional regulation 66 intergenic 66 metazoans 66 multicellular 66 piRNAs 66 nucleotide sequence 66 deuterostomes 66 rRNA 65 Chlamydomonas 65 endosymbiosis 65 orthologous 65 ciliated 65 subfamilies 65 cis regulatory 65 noncoding RNAs 65 serine protease 65 synthases 65 paralogs 65 isoforms 65 protein kinases 65 membrane protein 65 eukaryotic cell 65 budding yeast 65 multicellular organisms 65 S. cerevisiae 64 Alu elements 64 heterochromatic 64 sequence homology 64 prokaryotes 64 mitochondrial gene 64 subcellular localization 64 genes encoding 64 HOTAIR 64 H#K# [002] 64 chromatin structure 64 operon 64 transcriptomes 64 Volvox 64 Saccharomyces cerevisiae 64 untranslated regions 63 phylogeny 63 bacteria archaea 63 virulence genes 63 coding sequences 63 receptor molecule 63 splice variants 63 transmembrane protein 63 coevolution 63 pseudogenes 63 constitutively expressed 63 plastid 63 At#g# 63 serine threonine kinase 63 kinase domain 63 posttranslational modifications 63 homodimers 63 subcellular compartments 63 ncRNA 63 archaea 63 forkhead 63 CD1d 63 polypeptides 63 centromeric 63 UTRs 63 prokaryote 63 operons 62 transcriptome 62 noncoding 62 acetylation 62 ubiquitylation 62 endonuclease 62 coding genes 62 phosphorylates 62 mitogen activated protein kinase 62 amino terminal 62 mRNA transcripts 62 signal transduction 62 chordates 62 mitochondrial genomes 62 alternatively spliced 62 transmembrane 62 histone modifications 62 protein complexes 62 miRNAs 62 polynucleotide 62 biosynthesis 62 homodimer 62 ubiquitin ligase 62 ribonucleic acids 62 Rab5 62 constitutively 62 catenin 62 protein phosphorylation 62 protists 62 subfamily 62 nucleolin 62 interactome 62 lysine residues 62 transmembrane proteins 62 OCT4 62 oligomeric 62 intronic 62 bilaterians 62 isoleucine 62 clades 62 yeast Saccharomyces cerevisiae 62 Caenorhabditis elegans 62 ChIP seq 62 polyploid 62 mammalian genomes 62 Sulfolobus 62 noncoding RNA 62 centromere 62 nitrogenase 62 fungal genomes 62 phyla 62 noncoding DNA 62 RNA polymerases 62 tyrosine phosphorylation 62 splice variant 62 prokaryotic cells 62 amino acid sequences 62 tRNA 62 ribosomal RNA 61 amino acid residues 61 tetramer 61 proteomes 61 D. melanogaster 61 neural crest 61 DNA demethylation 61 Prevotella 61 glycosylated 61 Plasmodium 61 cDNAs 61 morphogenesis 61 phylogenies 61 amphioxus 61 proteases 61 defensin 61 Streptomyces 61 glycolipids 61 transcription factors 61 Rap1 61 5 hydroxymethylcytosine 61 plastids 61 ncRNAs 61 Nup# 61 phosphatases 61 C. elegans 61 clonally 61 heterodimers 61 Ago2 61 non coding RNAs 61 receptor CD# 61 amino acid sequence 61 nucleolar 61 fission yeast 61 phylogenetically 61 rDNA 61 phenotypic variation 61 methyltransferase 61 homologous 61 transcriptional repressor 61 chordate 61 Supplementary Fig 61 carboxyl terminal 61 eukaryotic genomes 61 cytochrome P#s 61 MALAT1 61 #S rRNA gene 61 proteins encoded 61 heterochromatin 61 exon 61 Eg5 61 transcriptional repression 61 ribonucleic acid RNA 61 endocytic 61 uncharacterized 61 transmembrane domains 61 deacetylation 61 major histocompatibility complex 61 DLC1 61 indel 61 Anopheles gambiae 61 RNAs 61 ERK1 2 61 dimerization 61 single celled 61 miRNA 61 ubiquitination 61 uracil 61 binding proteins 61 microRNAs miRNAs 61 regulates gene expression 61 enzymatic activity 61 postsynaptic 61 introns 60 primate genomes 60 transcriptional regulator 60 hepatocyte 60 homozygosity 60 coiled coil 60 non coding RNA 60 Klf4 60 uPAR 60 CRISPR 60 endosymbiont 60 evolutionary lineage 60 FGF signaling 60 Arabidopsis 60 transcriptional 60 intergenic regions 60 RANTES 60 c Myb 60 #S subunit 60 polyadenylation 60 small RNAs 60 #S rDNA 60 sRNA 60 Saccharomyces 60 missense mutations 60 intron 60 C. neoformans 60 Hox gene 60 cytosine 60 vacuolar 60 centromeres 60 cytosolic 60 proline rich 60 methyltransferases 60 RNA binding 60 PTPN# 60 cytochrome b 60 Arp2 3 60 symbiont 60 bacterium Escherichia coli 60 Xenopus laevis 60 mRNA expression 60 constitutively active 60 proto oncogene 60 DNMT1 60 cofactor 60 beta actin 60 coexpression 60 transcriptional activation 60 homeobox gene 60 mRNA molecules 60 KLF4 60 ribozyme 60 glycosylation 60 glycoproteins 60 RNA transcripts 60 vertebrate genomes 60 transgene expression 60 amino acid alanine 60 miRNA expression 60 Dictyostelium 60 3'UTR 60 synthase 60 glycosyltransferase 60 MAPKs 60 centrosome 60 H#K#me# 60 regulating gene expression 60 5 methylcytosine 60 encodes protein 60 CTCF 60 cellular organelles 60 ORFs 60 T. brucei 60 bacterial genomes 60 Cdc# 60 metalloprotease 60 BAC clones 60 effector molecules 60 phospho 60 cytoplasmic 60 Pol IV 60 ribosomal DNA 60 ligases 60 KCNQ1 60 serine threonine 60 PAX5 60 transmembrane receptor 60 H#K# methylation 60 secretory pathway 60 p# p# 60 membrane fusion 60 oxidative phosphorylation 60 tropomyosin 60 peptidoglycan 60 unicellular organisms 60 cell motility 60 intracellular 60 polypeptide 60 ubiquitinated 60 condensin 60 sphingolipid 60 downregulated 60 protist 59 cysteine residues 59 NF1 gene 59 Arabidopsis thaliana 59 ERBB2 59 RecA 59 PIP2 59 proteins 59 melanocyte 59 monophyletic 59 mammalian cells 59 telomeric 59 soluble proteins 59 globin genes 59 transferase 59 outer membrane proteins 59 c myc 59 cytochrome 59 microcephalin 59 guanine G 59 acetyltransferase 59 cytoplasmic domain 59 taxa 59 presenilin 59 homolog 59 maternally inherited 59 angiosperms 59 FOXO3a 59 intramolecular 59 EphB4 59 helicase 59 transcriptionally active 59 tumor suppressor protein 59 green alga Chlamydomonas 59 choanoflagellates 59 Alternative splicing 59 Fig. 3a 59 ribonucleoprotein 59 phenotypes 59 dimeric 59 PcG proteins 59 actin binding 59 bacterial symbiont 59 subcellular 59 MDCK cells 59 diploid 59 amplicons 59 viral genomes 59 GTPase 59 protein tyrosine phosphatase 59 trypanosome 59 ribosomal RNA rRNA 59 peroxisome 59 Dictyostelium discoideum 59 epitope 59 retrotransposon 59 cysteine protease 59 MicroRNA 59 ortholog 59 S. pombe 59 pRb 59 V3 loop 59 androgen receptor AR 59 Deinococcus 59 synuclein 59 cDNA 59 terrestrial vertebrates 59 segmental duplications 59 ERK1 59 lineages 59 organelles 59 morphological 59 proteolytic cleavage 59 IRAK1 59 retinoid X 59 T#M 59 miR# 59 FGFR3 59 gambiae 59 Eukaryotes 59 reinhardtii 59 telomere DNA 59 sequenced genomes 59 SH2 domain 59 Drosha 59 yeast genome 59 rRNA genes 59 synthetase 59 apoE 59 miRNA genes 59 enolase 59 intermediate filaments 59 dynamin 59 thymine 59 Syt II 59 NFAT 59 ribosomal protein 59 TAp# 59 placental mammals 59 morphogen 59 phylogeographic 59 phylogenetic 59 lincRNA 59 CPEB 59 TMEM#B 59 ontogeny 59 Foxp3 59 tyrosine kinases 59 PML RARA 59 nucleotide sequences 59 Oct4 59 cnidarians 59 epigenetic modification 59 somatic mutations 59 C. jejuni 59 mechanotransduction 59 DLX5 59 centrosomes 59 Smad3 59 neuroligins 59 carboxy terminal 59 metabolic enzymes 59 Buchnera 59 Notch signaling pathway 59 transactivation 59 genomic instability 59 vertebrate 59 short hairpin RNAs 59 signaling pathway 59 actin cytoskeleton 59 helical structure 59 p# NTR 58 chloroplasts 58 mitochondrial genome 58 primary cilium 58 phenotypic differences 58 transduction 58 GRP# 58 PcG 58 histone H4 58 DNA methyltransferase 58 Vps# 58 single celled yeast 58 antigenic variation 58 Nedd4 58 lyase 58 glycosylase 58 exocytosis 58 indels 58 Nanog 58 prion gene 58 phosphorylated 58 H#K# [001] 58 oncogenic 58 phosphoprotein 58 heterologous 58 transiently transfected 58 EF Tu 58 phagocytosis 58 methylation patterns 58 phenotype 58 mRNAs 58 overexpressing 58 esterase 58 Rho GTPases 58 trimer 58 ubiquitin ligases 58 homologies 58 protein coding RNAs 58 multicellular organism 58 gene encodes 58 mammalian genome 58 4E BP1 58 immunoglobulin genes 58 translocates 58 amino acid residue 58 Histone 58 cells transfected 58 Phytophthora species 58 Amborella 58 tRNA synthetases 58 RAS RAF MEK 58 P. patens 58 DNA polymerases 58 ATPase 58 phosphorylate 58 Activating mutations 58 multicellularity 58 disulfide bond 58 differentially expressed genes 58 secreted proteins 58 kinases 58 TIR1 58 biochemical assays 58 lincRNAs 58 basolateral 58 stem cell pluripotency 58 Phosphorylation 58 KIAA# 58 ligand binding 58 ribosomal proteins 58 membrane proteins 58 gene expression patterns 58 transduced 58 chromosome condensation 58 ligase 58 Huntingtin 58 genome rearrangements 58 CHD7 58 epigenetic modifications 58 Woese 58 Fig. 1A 58 photosystem II 58 p# INK4a 58 Arabidopsis genome 58 BMAL1 58 immunodominant 58 succinate dehydrogenase 58 metagenomes 58 E3 ligase 58 Symbiodinium 58 epigenetic inheritance 58 single celled organisms 58 fig. S1 58 IL 1β 58 exonuclease 58 MAPK 58 Interferon gamma 58 phosphorylation 58 bases adenine 58 drug metabolizing enzymes 58 PDZ domains 58 SOD1 58 caveolin 1 58 phospholipase 58 histone H3 58 tRNA genes 58 segmental duplication 58 Src 58 dsRNA 58 polypeptide chain 58 extracellular 58 C. albicans 58 ERK signaling 58 Tetrahymena 58 metagenome 58 Dysregulation 58 histone acetyltransferase 58 stilbene 58 demethylase 58 morphologically 58 filamentous fungus 58 post translational modifications 58 genetic recombination 58 efflux pump 58 acetyl CoA 58 organism genome 58 worm Caenorhabditis elegans 58 CRISPR Cas 58 enzymatic reactions 58 Reactive oxygen 58 JAK STAT 58 polyamine 58 mammalian fatty acid 58 MAPK pathway 58 Fig. 3A 58 P2X 58 cytokine receptor 58 Htt 58 transcription factor 58 cell adhesion molecule 58 gene encoding 58 RRM1 58 Drosophila 58 RNA molecules 58 gene locus 58 microRNA expression 58 wildtype 58 riboswitches 58 HERV 58 nucleotide 58 innate immunity 58 protein synthesis machinery 58 Polycomb 58 LIS1 58 ploidy 57 Hox genes 57 nucleobases 57 MMP# 57 worm C. elegans 57 glyceraldehyde 3 57 enzymatic pathways 57 ERK2 57 protein encoded 57 EGFP 57 epigenetic regulation 57 receptor mediated endocytosis 57 proteolysis 57 MT1 MMP 57 gene expression 57 erythrocytes 57 homologue 57 molecular 57 isoprenoid 57 cohesin 57 histone 57 cystic fibrosis transmembrane conductance 57 ATP synthase 57 Kinases 57 proapoptotic 57 QTLs 57 cyclin D1 57 CD# ligand 57 Nod1 57 genetic polymorphism 57 endogenous retroviruses 57 epithelial tissues 57 catalytically active 57 murine 57 meiotic recombination 57 heparan sulfate 57 viral RNA 57 #S ribosomal RNA 57 VE cadherin 57 functional polymorphism 57 multicellular animals 57 ChIP Seq 57 phylogenetic trees 57 peroxisomes 57 MiRNAs 57 IL #R 57 cadherins 57 splice junctions 57 GAPDH 57 polymerases 57 proteome 57 plectasin 57 CpG islands 57 animal phyla 57 insulin signaling pathway 57 chloroplast genome 57 oligomerization 57 cDNA libraries 57 homologous recombination 57 galectins 57 subunits 57 neurite outgrowth 57 virulence determinants 57 downregulation 57 Phylogenetic analysis 57 ribonuclease 57 mRNA 57 Ubx 57 kDa protein 57 odorant receptor 57 matrix metalloproteinase 57 protein kinase 57 crystallin 57 trophoblast 57 Proteobacteria 57 FGF receptor 57 β1 57 mutant allele 57 cadherin 57 microglial 57 disulfide 57 E1A 57 speciation 57 Myb 57 RNase P 57 thioredoxin 57 cytochrome c 57 mRNA decay 57 protein tyrosine kinase 57 MDR1 57 exon intron 57 Prochlorococcus 57 filoviruses 57 HDAC6 57 phosphatidylinositol 57 SGK1 57 miR #b [001] 57 BMP2 57 radial glia 57 LRRK2 57 methylated DNA 57 nucleases 57 TRPV3 57 membrane receptors 57 viral genome 57 metabolic pathways 57 hematopoiesis 57 previously uncharacterized 57 metalloproteins 57 dimers 57 ligands 57 biosynthetic pathway 57 isoform 57 GlcNAc 57 isotypes 57 single celled microorganisms 57 epigenetic silencing 57 mitochondrial DNA mtDNA 57 vimentin 57 receptor tyrosine kinase 57 epithelial cell 57 epistasis 57 cellulases 57 Integrin 57 splenocytes 57 hypermethylation 57 trypanosomes 57 histone demethylase 57 lacZ 57 exons 57 valine 57 DNA sequences 57 tetramers 57 TERT 57 transcriptome analysis 57 lysosomal 57 transduce 57 GTPases 57 oncogenesis 57 anaphase promoting complex 57 Sox2 57 unmethylated 57 vascular endothelial cells 57 gene duplications 57 multigenic 57 ankyrin repeat 57 FKBP# 57 syntaxin 57 sensu lato 57 gametophyte 57 STAT1 57 fibronectin 57 conserved sequences 57 symbioses 57 3' UTR 57 telomerase RNA 57 embryogenesis 57 M. pneumoniae 57 PfEMP1 57 RNA viruses 57 p#Kip# 57 phylogenetic analyzes 57 mitochondrial 57 COL#A# 57 Prox1 57 β catenin 57 Cx# [001] 57 CagA 57 glycan 57 site directed mutagenesis 57 virulence factors 57 MECP2 gene 57 LDL receptor 57 spontaneous mutations 57 helicases 57 thrombospondin 57 hexamer 57 transcriptional activator 57 chromosomal instability 57 Kv#.# 57 angiosperm 57 superoxide dismutase 57 mammalian brain 57 kD 57 BMP4 57 short hairpin RNA 57 #S rRNA genes 57 differentially regulated 57 phosphate S1P 57 histone acetylation 57 Transcriptome 57 enterocytes 57 glycan structures 57 Jhdm2a 57 Xenopus 57 ligand receptor 57 organelle 57 Argonaute proteins 57 cDNA library 57 APOBEC3G 57 chaperone proteins 57 F actin 57 Fas ligand 57 prion strains 57 organisms 57 chromosomal translocations 57 thymine T 57 lipoxygenase 57 HIF 1alpha 57 acetylated 57 Cdc7 57 p# MAPK 57 moss Physcomitrella patens 57 microRNA molecule 57 transcriptional coactivator 57 nitrogen fixation 57 transferrin receptor 57 NFκB 57 guanosine 56 TGF alpha 56 mtDNA 56 phosphatase 56 neural precursor 56 receptor kinases 56 intercellular signaling 56 histone protein 56 dimer 56 ENaC 56 tumor antigen 56 axon guidance 56 transcriptional regulators 56 V#F mutation 56 effector proteins 56 synaptotagmin 56 Polymorphisms 56 mutational analysis 56 cardiac fibroblasts 56 Wnts 56 CCR7 56 antibody antigen 56 #T# L1 56 MAP kinase 56 TRAF6 56 LRP6 56 L. pneumophila 56 single celled organism 56 focal adhesion kinase FAK 56 cofilin 56 mediated inhibition 56 mesoporous 56 glycolipid 56 proximal tubule 56 DNA methyltransferases 56 deletion mutant 56 globin gene 56 S1P 56 HDACs 56 ZNF# 56 transfected 56 protein isoforms 56 hydrogenase 56 phylogenetic tree 56 fig. S4 56 overexpression 56 aquaporin 56 endoderm 56 Rad# 56 dioxygenase 56 subunit 56 hydrolase 56 fluorescently labeled 56 cytokine receptors 56 endogenous 56 extracellular domain 56 flagellar 56 granule cells 56 alternative splicing 56 RNA splicing 56 copper zinc superoxide 56 Cytochrome 56 c KIT 56 adenine 56 PGCs 56 DEAR1 56 IMPDH 56 ribosomal 56 SATB1 56 metagenomic 56 mutualistic 56 HCV replication 56 histidine kinases 56 guanine 56 MLH1 56 epithelia 56 chemokine 56 iNOS 56 Platynereis 56 multidrug resistance 56 quantitative trait loci 56 mesenchyme 56 transposable elements 56 DDB1 56 loci 56 tyrosine kinase receptor 56 vertebrate evolution 56 amine oxidase 56 innate immune 56 organismal 56 CpG island 56 Signal transduction 56 promoter methylation 56 autotrophic 56 5 hmC 56 microbial genomes 56 DISC1 56 homeobox genes 56 coactivator 56 evolutionary conserved 56 Sir2 56 vertebrates 56 NF κB 56 hnRNP 56 alpha synuclein protein 56 ß catenin 56 meganuclease 56 micro RNAs 56 CD#b 56 decarboxylase 56 PU.1 56 phenotypic plasticity 56 X. laevis 56 HBx 56 comparative genomics 56 ribonucleotide 56 microsatellite markers 56 Caenorhabditis 56 unicellular organism 56 HLA genes 56 chemokine receptor 56 allelic variants 56 echinoderms 56 laforin 56 regulated kinase ERK 56 focal adhesions 56 RAR beta 56 SARS CoV 56 IFN gamma 56 adhesion molecule 56 molecular interactions 56 autosomal 56 c fos 56 Mammalian 56 membrane proximal 56 fibrillar 56 trans splicing 56 placentals 56 GluR1 56 Eukaryotic 56 micro RNA 56 mycobacterial 56 P. gingivalis 56 Xanthomonas 56 colocalization 56 histocompatibility 56 overexpressed 56 cytoskeletal 56 ciliates 56 RNA synthesis 56 Rickettsia 56 lymphoid 56 haemagglutinin 56 CHD5 56 TRIM5 56 miR #a [001] 56 homochirality 56 auxin 56 RCAN1 56 receptor gene 56 GNAQ 56 tumorigenicity 56 microRNA molecules 56 var genes 56 monomeric 56 thymidylate synthase TS 56 #BP# 56 synaptogenesis 56 clathrin 56 beta globin 56 Arabidopsis genes 56 dinucleotide 56 aspartyl 56 JNK1