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(Click for frequent words.) 74 cDNA 68 amplicons 68 PCR amplification 67 cDNA libraries 66 amplicon 66 methylated DNA 65 viral genome 65 #S rRNA 65 ssDNA 65 RNA sequences 65 viral RNA 64 #S rRNA gene 64 genomic loci 64 chromosomal DNA 64 array CGH 63 SDS PAGE 63 kilobase 63 #S rDNA 63 gDNA 63 PCR primers 63 contigs 63 nucleotide sequence 63 chromatin immunoprecipitation 63 Sanger sequencing 63 cell lysates 63 DNase 62 cDNAs 62 genomic sequence 62 gel electrophoresis 62 DNA sequences 62 dsDNA 62 mtDNA 62 bacterial genomes 62 RNA extraction 62 transcriptome 61 RNA transcripts 61 exons 61 oligo 61 rRNA 61 PCR amplified 61 intergenic regions 61 nucleic acid sequence 61 lysate 61 5 hmC 61 miRNA expression 61 DGGE 61 bacterial genome 61 polymerases 61 exon 61 lysates 61 ribosomal DNA 61 nucleic acid 61 biotinylated 61 telomeric 61 formalin fixed paraffin embedded 61 nucleotide sequences 60 microarray experiments 60 transcriptomes 60 cell lysate 60 single nucleotide polymorphism 60 mRNA molecules 60 RFLP 60 microarray 60 S. cerevisiae 60 oligonucleotide probes 60 oligos 60 Western blotting 60 orthologs 60 analyte 60 linkage disequilibrium 60 nucleotide 60 exome 60 FFPE 60 quantitative PCR 60 Gene Expression Assays 60 gene sequences 60 microsatellite markers 60 yeast genome 60 endonuclease 59 capillary electrophoresis 59 alternatively spliced 59 mRNA transcripts 59 Supplementary Fig 59 mRNA 59 heterochromatic 59 aCGH 59 segmental duplications 59 nucleotide substitutions 59 fluorescently labeled 59 fluorophore 59 PCR assay 59 substrate specificity 59 coding sequences 59 RNA molecule 59 FFPE samples 59 allelic 59 massively parallel sequencing 59 dsRNA 59 miRNA 59 BAC clones 59 transcriptome analysis 59 genotyping 59 array comparative genomic 59 uracil 59 qRT PCR 59 viral nucleic acids 59 intron 59 mutant strains 59 ribonucleic acid RNA 59 denaturing gradient gel electrophoresis 59 analytes 59 operon 59 nucleic acid molecules 59 mutant alleles 59 qPCR 59 exonuclease 59 proteomes 59 microarrays 59 PFGE 58 subcellular localization 58 kilobases 58 gene amplification 58 Saccharomyces cerevisiae 58 RT qPCR 58 ciliated 58 nuclease 58 thymidine 58 glycoproteins 58 tumor biopsies 58 quantitative PCR qPCR 58 PBMCs 58 somatic mutations 58 transmembrane 58 amino acid sequence 58 cDNA library 58 primate genomes 58 paraffin embedded tissue 58 diploid 58 immunohistochemistry IHC 58 GAPDH 58 splice junctions 58 gene expression 58 quantitative reverse transcriptase 58 cDNA synthesis 58 RNA polymerases 58 noncoding 58 messenger RNAs 58 PrPSc 58 monolayers 58 tRNAs 58 peptide sequences 58 oligonucleotide 58 untranslated regions 58 cytosolic 58 transfection 58 ribosomal proteins 58 intergenic 58 p# NTR 58 immunostaining 58 genomes 58 At#g# 58 amino acid residues 58 dinucleotide 58 transcriptome profiling 58 genomic sequences 58 antibody antigen 58 genomic 58 transcriptomic 58 indel 58 microarray analysis 58 multiplex PCR 57 genotypic 57 tetramers 57 ChIP Seq 57 transcriptome sequencing 57 antigen 57 mRNAs 57 coding exons 57 sequenced genomes 57 LC-MS/MS 57 cellulases 57 centromeric 57 virions 57 mitochondrial DNA mtDNA 57 enzymatically 57 coding genes 57 cysteines 57 DNA polymerase 57 ribosomal RNA rRNA 57 mRNA expression 57 ChIP chip 57 blastomeres 57 immunoglobulin genes 57 operons 57 gp# [002] 57 μl 57 guanine G 57 ChIP seq 57 FFPE tissue samples 57 metaphase 57 nucleic acids 57 annexin V 57 mitochondrial gene 57 glycan 57 situ hybridization 57 virulence genes 57 orthologous 57 homologous recombination 57 BeadChip 57 epitopes 57 organism genome 57 proteins 57 eukaryotic genomes 57 intronic 57 cDNA clone 57 heterochromatin 57 mitochondrial genomes 57 nucleases 57 lacZ 57 5' triphosphate 57 RNA sequencing 57 fluorophores 57 ELISAs 57 deoxyribonucleic acid DNA 57 mitochondrial genome 57 homologous genes 57 shRNAs 57 lentiviral 57 biochemical assays 57 quantitative RT PCR 57 FFPE tissues 57 TaqMan 57 hemagglutinin gene 57 immunofluorescence 56 polynucleotides 56 RT PCR 56 avidin 56 fungal genomes 56 extracellular domains 56 transfected cells 56 thymine T 56 transgene expression 56 fig. S1 56 diffraction pattern 56 paralogs 56 Fig. 1a 56 ncRNAs 56 Haplotype 56 lysine residues 56 fibronectin 56 centromeres 56 UTRs 56 SNP genotyping 56 #S rRNA genes 56 Arabidopsis genome 56 Solexa sequencing 56 outer membrane proteins 56 agarose gel 56 immunoblotting 56 mutagenesis 56 reaction RT PCR 56 targeted resequencing 56 HLA DQ 56 proteome 56 Cy3 56 sequence homology 56 situ hybridization FISH 56 oligonucleotide microarray 56 loci 56 proteolytic cleavage 56 S. enterica 56 PCR reactions 56 peptoid 56 immunohistochemical 56 RNA Seq 56 reverse transcriptase polymerase chain 56 shRNA 56 RNA 56 RNA molecules 56 agarose gel electrophoresis 56 T. brucei 56 abnormal prions 56 haplotype 56 chromatin structure 56 hexamers 56 short hairpin RNAs 56 oligonucleotide microarrays 56 A. thaliana 56 RNA splicing 56 non coding RNA 56 cultured cells 56 chromatogram 56 fluorochrome 56 Raman spectra 56 multiplex polymerase chain 56 transfected 56 peripheral blood mononuclear 56 maize genome 56 proteomic analysis 56 miRNA molecules 56 homodimer 56 streptavidin 56 chromatin immunoprecipitation ChIP 56 CpG 56 soluble proteins 56 transcriptional profiling 56 indels 56 tissue microarray 56 chromatograms 56 cell lysis 56 murine 56 FGFR3 56 archaeal 56 miRNAs 56 Affymetrix GeneChip 56 keratinocytes 56 pseudogenes 56 gene expression assays 56 fluorescence intensity 56 cytidine 56 IRE1 56 VNTR 56 unmethylated 56 deacetylation 56 genes encoding 55 fission yeast 55 MALDI TOF 55 peptides 55 coexpression 55 prion protein 55 plasmid DNA 55 EGFP 55 ribosomal RNA 55 phage 55 shRNA libraries 55 cDNA clones 55 MDCK cells 55 DNA amplification 55 homologs 55 aliquots 55 Illumina Solexa 55 fluorescent dyes 55 protein 55 phenotypic 55 Rap1 55 microRNA expression 55 splice variants 55 ligand binding 55 Dicer enzyme 55 bisulfite sequencing 55 tyrosine phosphorylation 55 magnetic beads 55 micro RNA 55 tetramer 55 trimer 55 vertebrate genomes 55 hexamer 55 cytosine 55 mammalian genomes 55 membrane fusion 55 tRNA synthetase 55 genome 55 mammalian cells 55 pyrosequencing 55 SOCS3 55 differentially expressed genes 55 PCR assays 55 polynucleotide 55 heterodimers 55 messenger RNA mRNA 55 quantitative trait loci 55 genotyping arrays 55 viral capsid 55 pRb 55 μL 55 biomolecule 55 immunoprecipitation 55 proviral DNA 55 PrP 55 C. albicans 55 nucleated cells 55 oligomer 55 H#K#me# 55 DNA nanoarrays 55 Immunohistochemical analysis 55 viral proteins 55 supernatants 55 human hepatocytes 55 endonucleases 55 polymerase chain reaction 55 FFPE tissue 55 quantitation 55 chimeric gene 55 replicase 55 viral genomes 55 proline rich 55 nucleolar 55 poly dA 55 unmethylated DNA 55 perinuclear 55 mannose 55 COL#A# 55 histone H3 55 carboxyl terminal 55 DNA demethylation 55 transgene 55 alleles 55 clonally 55 methyltransferase 55 comparative genomic hybridization 55 prion proteins 55 dimerization 55 immunohistochemistry 55 hybridomas 55 provides BioMaterial GenoTyping ™ 55 ncRNA 55 cDNA sequencing 55 VE cadherin 55 genome amplification 55 C. jejuni 55 capillary sequencing 55 TaqMan R 55 synthetic peptides 55 conformational changes 55 cysteine residues 55 adenine 55 messenger RNA 55 hepatocyte 55 trypanosome 55 karyotyping 55 haemagglutinin 55 mycobacterial 55 RNA fragments 55 NF1 gene 55 IgG antibody 55 F actin 55 Fourier transform infrared 55 glycosyltransferase 55 Fig. 1c 55 iTRAQ 55 polypeptides 55 oligonucleotide arrays 54 ubiquitinated 54 splice variant 54 miRNA sequences 54 DNMT1 54 immunocytochemistry 54 hepatocytes 54 donor acceptor 54 E. faecalis 54 hematoxylin 54 fluorescent molecules 54 gene expression microarrays 54 membrane proximal 54 amino acid alanine 54 multiplex ligation dependent 54 genetic sequences 54 CD1d 54 reproducibly 54 extracellular proteins 54 DNA strands 54 polymorphisms 54 Fig. 4a 54 phosphoprotein 54 cRNA 54 immunodominant 54 erythrocytes 54 kDa 54 telomeric DNA 54 heterozygosity 54 HEK# cells 54 Annexin V 54 ribozyme 54 enzymatic activity 54 nasopharyngeal swabs 54 phylogenetic analyzes 54 centromere 54 6S RNA 54 flow cytometric 54 Hemagglutinin 54 thioredoxin 54 PCR primer 54 isoforms 54 stranded RNA 54 ChIP 54 Polymerase Chain Reaction PCR 54 SNPs 54 RNA synthesis 54 lymphoblastoid cell lines 54 SurePrint 54 haplotypes 54 haploid 54 5 hydroxymethylcytosine 54 cytokeratin 54 epitope 54 glycoprotein 54 rDNA 54 small interfering RNA 54 IgG1 54 glycosylation 54 Western blot 54 membrane proteins 54 Alu elements 54 Microarray 54 cytogenetic 54 Leptospira 54 uPAR 54 Microarrays 54 macromolecule 54 Mycoplasma genitalium 54 flow cytometry 54 guanine 54 capsid proteins 54 hTERT 54 polypeptide 54 cysteine 54 CTCF 54 DNA polymerases 54 Salmonella enterica 54 transmembrane proteins 54 Drosophila genome 54 serum samples 54 heterologous 54 histidine 54 monomeric 54 IgG antibodies 54 pentamer 54 SOLiD System 54 centrifugation 54 evolutionarily conserved 54 megabases 54 IgG 54 viral particles 54 valine 54 beta globin gene 54 PCR RFLP 54 N. benthamiana 54 Nedd4 54 Amino acid 54 genome microarray 54 tRNA 54 gene rearrangements 54 polyadenylation 54 formalin fixed 54 haplotyping 54 phosphorothioate 54 isotype 54 eukaryotic cells 54 fluorogenic 54 tissue microarrays 54 #BP# 54 Arabidopsis genes 54 Htt 54 ELISA assay 54 transmembrane domain 54 germline cells 54 histone H4 54 RNA viruses 54 VeraCode 54 transcriptional activation 54 yeast Saccharomyces cerevisiae 54 secretory pathway 54 microarray gene expression 54 thymine 54 serine threonine kinase 54 QPCR 54 karyotype 54 glycolipids 54 RNA amplification 54 kD 54 adducts 54 glycosylated 54 crystallographic 54 immunofluorescent 54 prostate tissue 54 3'UTR 54 provirus 54 genotyping assays 54 FUS1 54 HLA typing 54 Genotypic 54 biomolecular interactions 54 RNAs 54 gene expression profiles 54 Qdot 54 cytochrome b 54 enveloped viruses 54 antisense RNA 54 T rubrum 54 bilayers 54 whole genome genotyping 54 nucleotides 54 #q#.# [002] 54 mutational 54 Taq DNA 54 antibody arrays 54 mutational analysis 54 β galactosidase 54 nucleic 54 transcriptional regulation 54 gene expression profiling 54 oligonucleotides 54 DNA Polymerase 54 emission spectra 54 Polymerase 53 eukaryotic 53 fluorescence detection 53 paraffin embedded 53 trophoblast cells 53 tRNA genes 53 granulocytes 53 peptide 53 prokaryotic 53 astrocytic 53 intramolecular 53 RNA seq 53 proteinase 53 genomewide 53 Typhi 53 Phenotypic 53 neutralizing antibody responses 53 Sequencing Systems 53 site directed mutagenesis 53 CD# + [002] 53 assay ELISA 53 adduct 53 nucleoprotein 53 somatic cells 53 ELISA 53 apoptotic cells 53 abnormal prion protein 53 M. pneumoniae 53 clades 53 biopsy specimens 53 situ hybridisation 53 MALDI 53 histone proteins 53 imprinted genes 53 catenin 53 insertions deletions 53 methylation 53 antibody 53 lysed 53 Phylogenetic analysis 53 H#K# [002] 53 ant genomes 53 fluorescently tagged 53 antisense strand 53 euchromatin 53 Fig. 1b 53 Fanconi proteins 53 gene expression patterns 53 phosphorylated 53 Transcriptome 53 messenger RNA mRNA molecules 53 condensin 53 cellularity 53 microbial genomes 53 dimeric 53 differentially expressed proteins 53 monolayer 53 polyglutamine 53 miRNA expression profiles 53 enolase 53 proteolysis 53 buffy coat 53 transient transfection 53 agouti gene 53 Fig. 1D 53 Methylation 53 sequencing 53 SNARE complex 53 RNA strand 53 phylogenetic analysis 53 immunofluorescence microscopy 53 dNTP 53 probe amplification MLPA 53 quasispecies 53 cyclic peptides 53 Arabidopsis thaliana 53 SMN2 gene 53 PALB2 53 peroxidase 53 nucleotide variations 53 keratinocyte 53 microRNAs miRNAs 53 Fig. 2b 53 transduced 53 supernatant 53 guanosine 53 molecular scissors 53 zebrafish embryos 53 Fig. 2B 53 IFN alpha 53 CHO cells 53 microRNA molecule 53 ligands 53 actin binding 53 cytoplasmic 53 effector proteins 53 protein encoded 53 brightfield 53 conserved sequences 53 binding affinity 53 Sanger Sequencing 53 dimer 53 plasma mass spectrometry 53 viral isolates 53 aneuploid 53 amino terminal 53 var genes 53 protein quantitation 53 serine protease 53 kinome 53 covalently linked 53 Clusterin 53 polymerase 53 staphylococci 53 phagocytosis 53 membrane protein 53 nucleosides 53 mRNA molecule 53 microplate format 53 recombinants 53 centrioles 53 mass spectrometric analysis 53 lysis buffer 53 reagents 53 de novo sequencing 53 L. pneumophila 53 cis regulatory 53 CRISPR 53 ERK1 2 53 morphogen 53 galactose 53 plastid 53 Western Blotting 53 histone modifications 53 hybridizations 53 carcinoembryonic antigen 53 antigens 53 short hairpin RNA 53 VSV G 53 dbSNP 53 high throughput sequencing 53 multiplexed assays 53 chaperone proteins 53 Taqman 53 silico prediction 53 nested PCR 53 mononuclear 53 hexose 53 KLF4 53 γ 53 piRNAs 53 trans splicing 53 PDZ domains 53 carboxylic acid 53 B. subtilis 53 structural rearrangements 53 serial dilutions 53 recombinantly 53 V3 loop 53 recombination hotspots 53 extracellular domain 53 metagenomic 53 ligand 53 lamina 53 meiotic recombination 53 histone modification 53 siRNA duplexes 53 FISH fluorescence 53 phenotype 53 V. cholerae 53 microdeletions 53 confocal microscopy 53 yeast cells 53 platypus genome 53 comparative genomic hybridization CGH 53 polyclonal 53 promoter methylation 53 CFTR cystic fibrosis transmembrane 53 proteolytic 53 Single Nucleotide Polymorphism 53 peptide antigens 53 deletion mutant 53 antigenic 53 Fig. 3a 53 Alexa Fluor 53 eukaryotic cell 53 RNA ribonucleic acid 53 mononuclear cells 53 proteomic analyzes 53 SNP rs# [001] 53 surface plasmon resonance SPR 53 ribonucleotide 53 K#N 53 H#Y 53 chromophore 53 antisera 53 coverslip 53 chromosomal regions 53 RAD# [001] 53 BRAF protein 52 GPI anchored 52 constitutively active 52 B. anthracis 52 embryoid bodies 52 subcellular structures 52 hematopoietic progenitors 52 VLPs 52 stilbene 52 enzyme linked immunosorbent 52 genome sequences 52 chromatid 52 agarose gels 52 luciferase 52 ALK mutations 52 Trypanosoma brucei 52 prokaryote 52 homologous 52 SIRT2 52 emulsion PCR 52 mesoporous 52 vimentin 52 matrix metalloproteinase 52 HybSelect 52 spectroscopic techniques 52 microsatellite loci 52 M. genitalium 52 differential gene expression 52 metagenomes 52 Enterobacter 52 methylation patterns 52 body louse genome 52 amyloid fibrils 52 SNP arrays 52 cytokine receptors 52 multigenic 52 centrosome 52 microplates 52 fig. S2 52 Tetrahymena 52 micrometer scale 52 chromosome #q 52 horseradish peroxidase 52 Golgi apparatus 52 subcellular compartments 52 RNase 52 alanine 52 microfluidic channels 52 gene deletions 52 Prevotella 52 non coding RNAs 52 constitutively expressed 52 NimbleGen CGH arrays 52 synthases 52 occludin 52 X ray diffraction pattern 52 CHO K1 52 Dicer 52 FMR1 gene 52 ubiquitylation 52 HER2 receptor 52 tau gene 52 Single Nucleotide Polymorphisms SNPs 52 HER2 HER3 52 Fig. 1C 52 amino acid sequences 52 prion infection 52 microinjection 52 COOH terminal 52 NimbleGen arrays 52 proteases 52 Chlamydomonas 52 histone 52 Single Nucleotide Polymorphism SNP 52 ^ sup #m 52 isogenic 52 endogenous retroviruses 52 phosphorylates 52 lectin 52 IFN gamma 52 Diels Alder reaction 52 amine oxidase 52 APOBEC3G 52 EF Tu 52 mRNA Seq 52 frameshift mutation 52 glycan structures 52 assay detects 52 ligase 52 Axiom Genomic Database 52 ultraconserved elements 52 #S ribosomal RNA 52 Agrobacterium 52 CYP#C# [002] 52 oocyte 52 KIAA# 52 M. capricolum 52 absorption spectra 52 sRNA 52 noncoding RNA 52 helices 52 HCMV 52 chemiluminescence 52 chromosomal rearrangements 52 nucleolin 52 fusion protein 52 fluorescence microscope 52 Fig. 2a 52 Vps# 52 epithelial cell 52 Taq polymerase 52 translationally 52 RNAP 52 Argonaute proteins 52 nM 52 dermatophytes 52 vesicular stomatitis virus 52 bases adenine 52 κ 52 affinity purification 52 clusterin 52 c myc 52 hematoxylin eosin 52 globin 52 macromolecules 52 vesicle fusion 52 apical membrane 52 bilayer 52 ribosomal 52 CaM 52 Rab5 52 divalent 52 succinate dehydrogenase 52 excision repair 52 microwell plates 52 SMN1 52 SURVEYOR Nuclease 52 phosphorylated proteins 52 Transfection 52 coiled coil 52 MWNT 52 idiotype 52 β catenin 52 biologically relevant 52 linearized 52 fluorescent probes 52 2D electrophoresis 52 paternally inherited 52 antigen binding 52 subcellular 52 flow cytometers 52 CCL#L# 52 eukaryote 52 genetic recombination 52 loxP 52 number variation CNV 52 budding yeast 52 metabolic enzymes 52 plasmid 52 nanomolar 52 chloroplast 52 CodeLink 52 Illumina HiSeq 52 fluorescence 52 isoform 52 hepatoma 52 MALDI MS 52 Mass Spectrometry MS 52 phylogenetically 52 homology 52 presynaptic 52 tumor specific antigen 52 C1q 52 multiplex assay 52 methylated 52 hypervariable 52 P. falciparum 52 missense mutations 52 immunohistochemical analysis 52 telomerase reverse transcriptase 52 STAT1 52 recombinant antibody 52 tropomyosin 52 reaction PCR 52 reagent kits 52 Fc receptor 52 codons 52 DNA methylation 52 m z 52 mammalian genome 52 receptor mediated endocytosis 52 ribozymes 52 homodimers 52 collagens 52 Figure 2C 52 phosphorylation