Related by context. All words. (Click for frequent words.) 71 haplotypes 69 epistasis 69 PTPN# 68 allele frequencies 68 #S rRNA 68 heterozygotes 67 genotypic 67 nucleotide substitutions 67 homozygosity 67 indel 67 haplotype 67 rs# [004] 67 splice junctions 67 quantitative trait loci 67 intron 67 allelic 67 amino acid substitutions 66 chromosome #p# [001] 66 homozygote 66 intergenic 66 QTLs 66 VNTR 66 SNP rs# [001] 66 intronic 66 coexpression 66 indels 66 miRNA expression 66 rs# [002] 66 H#K#me# 65 missense mutations 65 heterozygosity 65 nucleotide sequence 65 chromosome #q# [001] 65 GSTP1 65 microsatellite markers 65 virulence genes 65 Genotypic 65 #S rRNA gene 65 orthologous 65 genomewide 65 fig. S1 65 phenotypic variation 65 bacterial genomes 65 clusterin 64 noncoding 64 #q# [001] 64 #q# [002] 64 subcellular localization 64 subcellular compartments 64 single nucleotide polymorphism 64 immunoblotting 64 RFLP 64 Fig. 3b 64 sequence homology 64 Fig. 2B 64 HER2 expression 64 MLH1 64 Clusterin 64 Supplementary Fig 64 transgene expression 64 intergenic regions 63 DGGE 63 cDNA libraries 63 methyltransferase 63 loci 63 A. thaliana 63 kilobase 63 mRNA transcripts 63 Haplotype 63 orthologs 63 germline mutations 63 phylogenetic analyzes 63 gene polymorphisms 63 IL#B 63 immunoreactive 63 maternally inherited 63 immunohistochemical 63 mRNA expression 63 alternatively spliced 63 MSH2 63 chromosomal regions 63 segmental duplications 63 nanomolar 63 #S rDNA 63 chromosome #q 63 nucleotide sequences 63 amplicon 63 KIAA# 63 cytokeratin 63 alleles 63 Sanger sequencing 63 polymorphisms 63 centromeric 63 fig. S4 62 SNPs 62 PCR amplified 62 pairwise 62 qRT PCR 62 hypermethylated 62 Immunohistochemical analysis 62 rs# [001] 62 IgG antibody 62 UTRs 62 carcinoembryonic antigen 62 polymorphism 62 coding genes 62 methylated DNA 62 EphB4 62 splice variants 62 Drosophila genome 62 rRNA 62 variant allele 62 transcriptome sequencing 62 chromosome #q#.# [001] 62 lactate dehydrogenase 62 proteolytic cleavage 62 genotypes 62 microdeletions 62 Supplementary Table 62 somatic mutations 62 ChIP Seq 62 mammographic density 62 multigenic 62 #p# [003] 62 immunofluorescence 62 CD# expression [001] 62 PCR RFLP 62 cytochrome b 62 succinate dehydrogenase 62 transcriptomes 62 ZNF# 62 bacterial virulence 62 SNP rs# [002] 62 fig. S2 62 covariance 62 Phylogenetic analysis 61 chromosome #q# [002] 61 mtDNA 61 mutant alleles 61 TRAF1 C5 61 genes differentially expressed 61 chromosomal rearrangements 61 immunostaining 61 polynucleotides 61 ChIP chip 61 linkage disequilibrium LD 61 thyroglobulin 61 histone modifications 61 ERBB2 61 Fig. 1c 61 Chromosomal 61 segmental duplication 61 polygenic 61 Phenotypic 61 rs# [003] 61 vimentin 61 DNMT1 61 #p#.# [002] 61 E#F# 61 gene loci 61 ribosomal proteins 61 LRP5 61 de novo synthesis 61 synteny 61 evolutionarily conserved 61 proteomes 61 differential gene expression 61 BAC clones 61 binding affinity 61 mtDNA mutations 61 penetrance 61 SAXS 61 sarcosine 61 serum antibodies 61 #S rRNA genes 61 S. cerevisiae 61 amino terminal 61 immunoreactivity 61 N acetyltransferase 61 univariate 61 ORFs 61 Alu elements 61 cytidine 61 exon intron 61 OCA2 61 major histocompatibility complex 61 genomic loci 61 dysbindin 61 homology 61 coding sequences 61 promoter methylation 61 #p#.# [001] 61 malignant nodules 61 RNase H 61 uPAR 61 cis regulatory 61 multivariate Cox 61 receptor binding 61 Immunohistochemical staining 61 RT qPCR 61 outbred 61 mitochondrial DNA mtDNA 61 polyploid 61 microsatellite instability 61 nitrotyrosine 61 APOL1 61 VKORC1 61 PALB2 61 genome rearrangements 61 homodimers 60 heterozygote 60 deacetylation 60 V3 loop 60 cM 60 paternally inherited 60 ribonucleic acid RNA 60 glycan 60 TUNEL 60 synuclein 60 fig. S# 60 cyclin E 60 Linear regression 60 transfection efficiency 60 bivariate 60 Fig. 1a 60 tyrosine phosphorylation 60 chromosome #q#.# [002] 60 microRNA expression 60 lipoprotein cholesterol 60 At#g# 60 ribosomal DNA 60 mRNA molecules 60 H#K# [002] 60 cytosine methylation 60 Arabidopsis genome 60 Fig. 1b 60 nucleotide substitution 60 mitochondrial gene 60 mutant allele 60 dinucleotide 60 genetic polymorphism 60 HLA B# 60 GPx 60 TIMP 1 60 MTT assay 60 TRIM5 60 cDNA 60 allelic variants 60 lymph node metastasis 60 ssDNA 60 paralogs 60 eotaxin 60 chromosome #p#.# 60 mammalian genomes 60 multivariable analysis 60 ChIP seq 60 apo AI 60 amino acid sequences 60 QTL mapping 60 picomolar 60 genetic loci 60 causal variants 60 κ 60 untranslated regions 60 monozygotic twins 60 hypermethylation 60 cell lysates 60 #q#.# [001] 60 tetramers 60 substrate specificity 60 chromosomal instability 60 genomic DNA 60 lysine residues 60 ANOVA 60 HER2 overexpression 60 heterodimers 60 interobserver 60 FGFR3 60 Amino acid 60 Lp PLA 2 60 occludin 60 Fig. 2b 60 chemosensitivity 60 histone modification 60 somatic mutation 60 Fig. 1E 60 Ki# 60 mutant BRAF 60 JAK2 mutation 60 PON1 60 CYP#D# gene 60 RRM1 60 CpG 60 KLF4 60 germline mutation 60 hTERT 60 phenotypes 60 APOC3 60 proto oncogene 60 3' UTR 60 non coding RNA 60 amino acid residues 60 lipoxygenase 60 AFLP 60 DNA methylation patterns 60 alkaline phosphatase ALP 60 P cadherin 60 immunodominant 60 6S RNA 60 LPA gene 60 ABCB1 60 cysteines 60 antibody antigen 60 Plasmodium vivax 60 epistatic 60 nonparametric 60 TCF#L# 60 K#N 60 TSC1 60 logistic regression analysis 60 binding affinities 60 #q#.# [002] 60 polyadenylation 60 Mutational 60 C#Y 60 ncRNA 60 gene amplification 60 #p# [001] 59 COL#A# 59 proteomic analysis 59 TMEM#B 59 differentially expressed genes 59 exonuclease 59 monomeric 59 BRAF protein 59 quantitative PCR 59 transcriptomics 59 morphologic 59 ABL1 59 heterozygous 59 cDNA microarray 59 cDNAs 59 differentially expressed proteins 59 exons 59 miRNA genes 59 homodimer 59 miR #b [002] 59 enolase 59 microglial 59 chromatin immunoprecipitation 59 valine 59 Fig. 1D 59 array CGH 59 methylation patterns 59 Fig. 1A 59 PCa 59 conserved sequences 59 sequenced genomes 59 nucleic acid sequence 59 site directed mutagenesis 59 CYP#D# 59 ribosomal protein 59 cystatin C 59 genetic markers 59 replicon 59 archaeal 59 hypervariable 59 RNA viruses 59 δ 59 β1 59 cDNA library 59 prion strains 59 nucleases 59 FDG uptake 59 monophyletic 59 mutational 59 CXCL5 59 allelic variation 59 uracil 59 C. neoformans 59 GSTM1 59 oligo 59 V#F mutation 59 gene locus 59 RUNX3 59 hierarchical clustering 59 chromosomal aberrations 59 microarray experiments 59 Fig. 3a 59 orthologous genes 59 matrix metalloproteinase 59 TOP2A 59 3'UTR 59 quantitative RT PCR 59 histone H3 59 DHPLC 59 haplogroups 59 rDNA 59 endonuclease 59 chromatogram 59 microbial genome 59 HLA DR 59 transferase 59 aneuploidy 59 parasitaemia 59 cathepsin B 59 BRAF V#E mutation 59 transcriptional repressor 59 serpin 59 clade B 59 sporadic ALS 59 CDK4 59 constitutively active 59 CNVs 59 coding exons 59 eukaryote 59 genetic polymorphisms 59 c Src 59 p# activation 59 tRNA synthetase 59 chromosomal rearrangement 59 trimer 59 CYP#C# [002] 59 HAAH 59 serine protease 59 CDKN2A 59 NNRTI resistance 59 ncRNAs 59 K ras mutations 59 PIK3CA 59 fluoroquinolone resistance 59 Haptoglobin 59 multigene 59 heritable traits 59 serum biomarkers 59 cTnI 59 fig. S6 59 meiotic recombination 59 CISH 59 CpG islands 59 LRP6 59 echogenicity 59 amino acid sequence 59 proline rich 59 FLT3 59 genetic relatedness 59 CIN2 + 59 Single Nucleotide Polymorphism 59 Fig. 2a 59 protein conformation 59 protein tyrosine phosphatase 59 pseudogenes 59 RANTES 59 organism genome 59 CC genotype 59 MMP9 59 TIMP 59 PCA3 gene 59 Histone 59 heterologous expression 59 immunoglobulin G 59 transmembrane domain 59 fluorescence intensity 59 epitope 59 allele frequency 59 IL#B gene 59 D. melanogaster 59 RAR beta 59 histone acetylation 59 STAT1 59 T#I [002] 58 morphometric analysis 58 MLL2 58 situ hybridization 58 M. pneumoniae 58 TET2 58 mosaicism 58 melatonin receptor 58 Cyclin E 58 amino terminus 58 Transcriptome 58 ligand binding 58 pyrimidine 58 Rap1 58 isotype 58 ε 58 prokaryote 58 catechol O methyltransferase 58 transmembrane 58 micro RNA 58 primate genomes 58 TP# gene 58 immunohistochemical analysis 58 gene expression microarrays 58 kilobases 58 autosomal 58 amino acid substitution 58 Fig. 4a 58 MTHFR gene 58 denaturing gradient gel electrophoresis 58 Single Nucleotide Polymorphism SNP 58 PITX2 58 ERCC1 58 TT genotype 58 transfected cells 58 SMAD4 58 C#T [002] 58 missense 58 telomeric 58 UGT#A# 58 colocalization 58 mutational analysis 58 posttranslational modifications 58 splice variant 58 HOXB# 58 yeast genome 58 LRRK2 gene 58 SOCS3 58 CGG repeats 58 5 HTTLPR 58 recombination hotspots 58 P. falciparum 58 μM 58 genomic variation 58 surface plasmon resonance 58 T#M 58 amplicons 58 S. enterica 58 AMACR 58 HMGA2 58 RNA sequences 58 vitamin D receptor 58 ADRB2 58 p# mutation 58 MAPK pathway 58 cystatin 58 contigs 58 cellularity 58 β amyloid 58 sDNA 58 neutralizing antibody 58 transcriptome 58 apolipoprotein B 58 PRNP 58 SNP arrays 58 CCL#L# 58 multiple linear regression 58 HLA G 58 oxLDL 58 γ 58 bisulfite sequencing 58 CagA 58 dsDNA 58 miRNAs miR 58 dimeric 58 trinucleotide 58 Phylogenetic 58 Genotypes 58 Western blotting 58 transcriptional profiling 58 bcl 2 58 Fig. 4C 58 cellular prion protein 58 dipole moment 58 EF Tu 58 Polymorphism 58 viral genomes 58 coiled coil 58 glycosyltransferase 58 mutations 58 GSTT1 58 plasma lipid 58 karyotype 58 ROC curves 58 exome 58 ortholog 58 gene expression profiles 58 λ 58 carboxy terminal 58 ribosomal RNA rRNA 58 cm -1 58 RNA Seq 58 CRISPR Cas 58 etiologic 58 Htt 58 5 methylcytosine 58 transmembrane protein 58 eukaryotic genomes 58 HOTAIR 58 genes CYP#C# 58 Genetic variation 58 short hairpin RNA 58 nucleolar 58 methylation 58 immunofluorescence staining 58 nucleotide variations 58 EGFR receptor 58 quasispecies 58 interferon γ 58 Fig. 3B 58 -# mV [001] 58 operons 58 exon 58 DFT calculations 58 S. pombe 58 CRISPR 58 prion protein gene 58 phenotype 58 Jhdm2a 58 CD#c 58 glycolytic 58 FKBP# 58 SUVmax 58 induced sputum 58 immunofluorescent 58 functional polymorphism 58 constitutively 58 Fig. 2A 58 receptor kinase 58 fission yeast 58 uncharacterized genes 58 antigenic 58 JAK STAT 58 DNA sequences 58 IgG1 58 sensitivity specificity 58 constitutively expressed 58 TCF#L# gene 58 phenotypically 58 μg ml 58 evolvability 58 CD1d 58 Fig. 1e 58 TMPRSS2 ERG fusion 58 serum homocysteine 58 noncoding RNAs 58 spontaneous mutations 58 colorectal tumor 58 intraobserver 58 gamma globin 58 osteoclast 58 quantitative PCR qPCR 58 m z 58 Histologic 58 Fig. 1C 58 homozygotes 58 SPINK1 58 transcriptional regulation 58 breast carcinomas 58 μmol L 58 Arabidopsis genes 58 transfected 58 susceptibility gene 58 JAK2 V#F 58 transthyretin 58 Fig. 1B 58 tumorigenicity 58 SLITRK1 58 HLA DQ2 58 apoE 58 MnSOD 58 frameshift mutation 58 STAT4 58 chromosome #p# [002] 58 ankyrin repeat 58 transcriptional profiles 58 haplogroup 57 protein isoforms 57 IGFBP 57 Fig. 2C 57 prognostic marker 57 transmembrane domains 57 viral genome 57 p tau 57 HCV replication 57 SIRT2 57 adipogenic 57 missense mutation 57 generalized vitiligo 57 ultraconserved elements 57 troponin T 57 isogenic 57 PAX5 57 mRNA decay 57 gene rearrangements 57 familial aggregation 57 RT PCR assay 57 oligomer 57 dI dV 57 polynucleotide 57 Figure 2C 57 chromosomal DNA 57 c MYC 57 HER3 57 PCR amplification 57 CPEB 57 aneuploid 57 atypical hyperplasia 57 phylogenetic analysis 57 PCR assay 57 BARD1 57 Bonferroni correction 57 miR #a [001] 57 epigenetic modification 57 unmethylated 57 KRAS mutations 57 silico prediction 57 interleukin IL 57 HLA DRB1 57 isoenzyme 57 transcriptional activation 57 SDS PAGE 57 glycosylated 57 DRD2 57 peroxidase 57 lipoprotein 57 ALK mutations 57 phenotypic traits 57 kD 57 WNK1 57 phenotypic 57 analyte 57 methyltransferases 57 metabolite concentrations 57 extracellular domains 57 KIF6 gene 57 anisotropy 57 immunohistochemical staining 57 hepatoma 57 heterochromatic 57 platelet reactivity 57 ERK signaling 57 maize genome 57 fungal genomes 57 HRCT 57 causative mutations 57 reaction RT PCR 57 PrPSc 57 bivariate analysis 57 HAR1 57 independent prognostic marker 57 microdeletion 57 miR #a [002] 57 Dysregulation 57 multiplexed assays 57 PARP inhibition 57 TNFalpha 57 EGFP 57 C. albicans 57 positional cloning 57 genotype 57 operon 57 differentially regulated 57 K#R [002] 57 osteoprotegerin 57 gene expression patterns 57 pleiotropic 57 genetic variation 57 QTL 57 disulfide bond 57 mesothelin 57 Lp PLA2 57 HNPCC 57 topoisomerase 57 fluorescently tagged 57 susceptibility locus 57 microglial activation 57 exome sequencing 57 logistic regression analyzes 57 correlation coefficients 57 transgenic mice expressing 57 CYP#B# 57 Homology 57 dopamine transporter 57 glomerular 57 FGFs 57 carboxyl terminal 57 receptor ligand 57 PDZ domain 57 HbF 57 BMAL1 57 p# mutations 57 metaplasia 57 Microarrays 57 Prevotella 57 gp# [002] 57 FISH fluorescence 57 APOA5 57 Single Nucleotide Polymorphisms SNPs 57 lactase persistence 57 chemiluminescence 57 ω 57 E. faecalis 57 HOMA IR 57 fractional anisotropy 57 CALHM1 57 mutation 57 RNA polymerases 57 proapoptotic 57 Morphological 57 cultured neurons 57 η 57 amyloidogenic 57 KRAS mutation 57 assay detects 57 microRNA molecules 57 agarose gel electrophoresis 57 genetic variability 57 genotypic resistance 57 globin 57 Proteobacteria 57 Microarray analysis 57 HLA DQ 57 X. laevis 57 mammalian genome 57 quasiparticle 57 eIF4E 57 methylenetetrahydrofolate reductase 57 IFN α 57 Whole Genome 57 VEGF receptor 57 oligonucleotide microarrays 57 Hsp# [001] 57 lymphovascular invasion 57 hepatocellular carcinomas 57 ESR1 57 absorption spectra 57 genomic 57 wildtype 57 apparent diffusion coefficient 57 NF1 gene 57 alpha synuclein gene 57 linear regression analyzes 57 phospho 57 metazoan 57 Chlamydomonas 57 excision repair 57 Hcrt 57 ploidy 57 MYH9 57 multivariable Cox 57 ubiquitinated 57 antisense strand 57 isotypes 57 Coulomb blockade 57 MSMB 57 fig. S3 57 RNase L 57 Gaussian distribution 57 discriminant analysis 57 SNP genotyping 57 EGFR protein 57 CNTNAP2 57 Poisson regression 57 cytoplasmic tail 57 S nitrosylation 57 imprinted genes 57 serovar 57 striatal 57 CHI#L# 57 nucleosome positioning 57 tPSA 57 #BP# 57 MMP# 57 enterotypes 57 YKL 57 Leydig cells 57 FMR1 gene 57 Cry1Ac 57 autism susceptibility genes 57 dimerization 57 BRAF mutations 57 histologically 57 PON1 gene 57 advanced adenomas 57 phenotypic differences 57 F actin 57 insertion deletion 57 aCGH 57 ß catenin 57 peptide sequences 57 homologs 57 X chromosome inactivation 57 confidence intervals CIs 57 t# c# CLA 57 Pearson correlation coefficients 57 maternal serum 57 pertussis toxin 57 cadherin 57 Y chromosomal 57 MC1R gene 57 introgression 57 surface plasmon resonance SPR 57 herpesviruses 57 potent inhibitors 57 MIF protein 57 electron density 57 PGDH 56 transposable elements 56 CAG repeats 56 clinicopathological 56 intact parathyroid hormone 56 globin genes 56 σ 56 homologies 56 aggrecan 56 HLA DRB1 * 56 Leydig cell 56 proteolysis 56 EGF receptors 56 hexose 56 colorectal neoplasia 56 kinase domain 56 astrocytic 56 NKG2D 56 seropositivity 56 IL 1ß 56 defensin 56 micrometastasis 56 clades 56 IFN alpha 56 SMase 56 phenotypic expression 56 T rubrum 56 mitochondrial genome 56 cells transfected 56 trimers 56 EBNA1 56 Multivariate analysis 56 epigenetic modifications 56 tumoral 56 adenylate cyclase 56 Alternative splicing 56 insertional mutagenesis 56 odorant receptor 56 chimpanzee genomes 56 extracellular domain 56 pN 56 phosphorylated tau 56 ^ sup 56 Raman spectra 56 HDAC6 56 morphogen 56 5 hmC 56 inbred strains 56 genotyped 56 mitogen activated protein kinase 56 endoglin 56 immunohistochemistry IHC 56 Pearson correlation coefficient 56 tetramer 56 isoleucine 56 BRAF V#E 56 selfing 56 GNAQ 56 antibody titer 56 linewidth 56 APOE e4 56 autocorrelation 56 gastric carcinoma 56 variant rs# 56 HLA DRB1 SE 56 pathogenic mutations 56 genomic deletions 56 #S subunit 56 T2 lesions 56 SETDB1 56 ciliated 56 serum HBV DNA 56 chimerism 56 chlamydial 56 N. gonorrhoeae 56 mtDNA sequence 56 thymine 56 magnetic susceptibility 56 susceptibility loci 56 massively parallel sequencing 56 soluble proteins 56 breast cancer genes BRCA1 56 NRF2 gene 56 chromatin immunoprecipitation ChIP 56 PKC isoforms 56 Fig. 3A 56 deletion mutant 56 C#BL/#J 56 ^ sup #m 56 artifactual 56 5 hydroxymethylcytosine 56 aneuploidies 56 prothrombotic 56 zebrafish genome 56 homology modeling 56 kDa protein 56 Upregulation 56 claudin 56 Mendelian 56 mycobacterial 56 trabecular 56 genomic sequence